Bacterial sodium channel in high calcium, I222 space group
Organism: Alkalilimnicola ehrlichei
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00520
PDB ID: 4LTO
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 22.5 Å
Number of TM segments = 8
Sequence positions:
A: 153-168|215-231
C: 154-169|213-230
B: 154-169|213-230
D: 153-168|215-230
Tilt angles:
A - Segment: 153-168 - Tilt: 12.2°
A - Segment: 215-231 - Tilt: 21.9°
C - Segment: 154-169 - Tilt: 25.9°
C - Segment: 213-230 - Tilt: 38.8°
B - Segment: 154-169 - Tilt: 21.6°
B - Segment: 213-230 - Tilt: 38.1°
D - Segment: 153-168 - Tilt: 16.1°
D - Segment: 215-230 - Tilt: 29.1°
Structural assessment:
MAIDEN score = -53.4028
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]