Neisseria gonorrhoeae MtrD Inner Membrane Multidrug Efflux Pump
Organism: Neisseria gonorrhoeae
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00873
PDB ID: 4MT1
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 25.2 Å
Number of TM segments = 11
Sequence positions:
A: 10-27|338-355|363-381|392-408|440-456|468-487|538-554|870-888|895-916|935-951|982-998
Tilt angles:
A - Segment: 10-27 - Tilt: 16.9°
A - Segment: 338-355 - Tilt: 21.9°
A - Segment: 363-381 - Tilt: 39.2°
A - Segment: 392-408 - Tilt: 13.1°
A - Segment: 440-456 - Tilt: 24.8°
A - Segment: 468-487 - Tilt: 27.4°
A - Segment: 538-554 - Tilt: 10.5°
A - Segment: 870-888 - Tilt: 26.6°
A - Segment: 895-916 - Tilt: 52.4°
A - Segment: 935-951 - Tilt: 19.6°
A - Segment: 982-998 - Tilt: 28.6°
Structural assessment:
MAIDEN score = -118.3875
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]