Neisseria gonorrhoeae MtrD Inner Membrane Multidrug Efflux Pump
Organism: Neisseria gonorrhoeae
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00873
PDB ID: 4MT1
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 29.4 Å
Number of TM segments = 12
Sequence positions:
A: 7-25|335-354|359-380|389-408|438-455|464-489|525-542|850-872|877-908|910-934|965-983|987-1008
Tilt angles:
A - Segment: 7-25 - Tilt: 19.8°
A - Segment: 335-354 - Tilt: 3.8°
A - Segment: 359-380 - Tilt: 36.6°
A - Segment: 389-408 - Tilt: 11.4°
A - Segment: 438-455 - Tilt: 21.6°
A - Segment: 464-489 - Tilt: 39.2°
A - Segment: 525-542 - Tilt: 16.8°
A - Segment: 850-872 - Tilt: 31.5°
A - Segment: 877-908 - Tilt: 52.0°
A - Segment: 910-934 - Tilt: 44.9°
A - Segment: 965-983 - Tilt: 28.6°
A - Segment: 987-1008 - Tilt: 27.0°
Structural assessment:
MAIDEN score = -99.4806
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]