Structure basis of lipopolysaccharide biogenesis
Organism: Salmonella typhimurium
Model: Experimental
Representation: Atomistic
Type: β-sheet
Pfam Acc: PF03968
PDB ID: 4N4R
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 19.8 Å
Number of TM segments = 23
Sequence positions:
A: 243-249|285-290|312-318|326-333|355-362|370-376|390-397|410-416|429-435|450-457|482-490|513-521|554-564|579-588|606-615|624-631|637-646|653-660|686-696|699-706|717-723|728-735
B: 82-88
Tilt angles:
A - Segment: 243-249 - Tilt: 42.6°
A - Segment: 285-290 - Tilt: 29.2°
A - Segment: 312-318 - Tilt: 30.5°
A - Segment: 326-333 - Tilt: 29.6°
A - Segment: 355-362 - Tilt: 41.3°
A - Segment: 370-376 - Tilt: 32.9°
A - Segment: 390-397 - Tilt: 29.2°
A - Segment: 410-416 - Tilt: 35.1°
A - Segment: 429-435 - Tilt: 36.2°
A - Segment: 450-457 - Tilt: 43.0°
A - Segment: 482-490 - Tilt: 44.6°
A - Segment: 513-521 - Tilt: 41.0°
A - Segment: 554-564 - Tilt: 53.6°
A - Segment: 579-588 - Tilt: 52.9°
A - Segment: 606-615 - Tilt: 54.5°
A - Segment: 624-631 - Tilt: 47.7°
A - Segment: 637-646 - Tilt: 48.4°
A - Segment: 653-660 - Tilt: 45.0°
A - Segment: 686-696 - Tilt: 54.2°
A - Segment: 699-706 - Tilt: 51.9°
A - Segment: 717-723 - Tilt: 44.7°
A - Segment: 728-735 - Tilt: 38.0°
B - Segment: 82-88 - Tilt: 36.1°
Structural assessment:
MAIDEN score = 63.1225
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]