Human Smoothened Receptor structure in complex with cyclopamine
Organism: Homo sapiens
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF01534
PDB ID: 4O9R
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 37.0 Å
Number of TM segments = 7
Sequence positions:
A: 39-65|72-95|121-149|157-180|196-226|346-372|406-429
Tilt angles:
A - Segment: 39-65 - Tilt: 18.5°
A - Segment: 72-95 - Tilt: 29.2°
A - Segment: 121-149 - Tilt: 40.7°
A - Segment: 157-180 - Tilt: 4.3°
A - Segment: 196-226 - Tilt: 30.3°
A - Segment: 346-372 - Tilt: 20.0°
A - Segment: 406-429 - Tilt: 21.4°
Structural assessment:
MAIDEN score = -75.6253
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]