Mechanism of transhydrogenase coupling proton translocation and hydride transfer
Organism: Thermus thermophilus
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF02233
PDB ID: 4O9U
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 29.4 Å
Number of TM segments = 22
Sequence positions:
A: 5-24|34-53|63-84
C: 5-24|33-50|66-85
B: 3-22|30-48|56-74|83-101|116-138|148-169|181-198
D: 4-23|28-46|59-76|81-100|116-145|147-168|182-199|203-224|227-246
Tilt angles:
A - Segment: 5-24 - Tilt: 4.4°
A - Segment: 34-53 - Tilt: 22.5°
A - Segment: 63-84 - Tilt: 28.4°
C - Segment: 5-24 - Tilt: 12.9°
C - Segment: 33-50 - Tilt: 6.4°
C - Segment: 66-85 - Tilt: 21.2°
B - Segment: 3-22 - Tilt: 20.9°
B - Segment: 30-48 - Tilt: 10.8°
B - Segment: 56-74 - Tilt: 9.6°
B - Segment: 83-101 - Tilt: 10.2°
B - Segment: 116-138 - Tilt: 34.7°
B - Segment: 148-169 - Tilt: 29.4°
B - Segment: 181-198 - Tilt: 13.6°
D - Segment: 4-23 - Tilt: 15.2°
D - Segment: 28-46 - Tilt: 8.9°
D - Segment: 59-76 - Tilt: 18.4°
D - Segment: 81-100 - Tilt: 24.3°
D - Segment: 116-145 - Tilt: 41.6°
D - Segment: 147-168 - Tilt: 24.4°
D - Segment: 182-199 - Tilt: 4.9°
D - Segment: 203-224 - Tilt: 28.8°
D - Segment: 227-246 - Tilt: 26.6°
Structural assessment:
MAIDEN score = -174.1835
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]