UbiA homolog from Aeropyrum pernix K1
Organism: Aeropyrum pernix
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF01040
PDB ID: 4OD5
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 25.0 Å
Number of TM segments = 6
Sequence positions:
A: 6-22|27-57|77-97|162-180|186-222|227-247
Tilt angles:
A - Segment: 6-22 - Tilt: 35.7°
A - Segment: 27-57 - Tilt: 57.8°
A - Segment: 77-97 - Tilt: 44.3°
A - Segment: 162-180 - Tilt: 36.8°
A - Segment: 186-222 - Tilt: 59.3°
A - Segment: 227-247 - Tilt: 46.1°
Structural assessment:
MAIDEN score = -62.7948
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]