UbiA homolog from Aeropyrum pernix K1
Organism: Aeropyrum pernix
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF01040
PDB ID: 4OD5
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 23.0 Å
Number of TM segments = 6
Sequence positions:
A: 7-21|26-53|78-96|159-176|200-222|224-242
Tilt angles:
A - Segment: 7-21 - Tilt: 27.1°
A - Segment: 26-53 - Tilt: 57.9°
A - Segment: 78-96 - Tilt: 39.5°
A - Segment: 159-176 - Tilt: 35.3°
A - Segment: 200-222 - Tilt: 49.7°
A - Segment: 224-242 - Tilt: 31.2°
Structural assessment:
MAIDEN score = -20.8416
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]