Nitrate transporter
Organism: Arabidopsis thaliana
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00854
PDB ID: 4OH3
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 21.0 Å
Number of TM segments = 24
Sequence positions:
A: 35-55|69-85|105-119|146-164|188-205|221-237|348-361|385-406|422-436|468-481|506-524|544-558
B: 38-53|72-86|104-116|150-164|192-205|221-235|346-360|385-403|421-434|468-481|503-517|547-561
Tilt angles:
A - Segment: 35-55 - Tilt: 54.7°
A - Segment: 69-85 - Tilt: 36.6°
A - Segment: 105-119 - Tilt: 22.0°
A - Segment: 146-164 - Tilt: 49.0°
A - Segment: 188-205 - Tilt: 43.4°
A - Segment: 221-237 - Tilt: 41.4°
A - Segment: 348-361 - Tilt: 31.2°
A - Segment: 385-406 - Tilt: 52.0°
A - Segment: 422-436 - Tilt: 23.8°
A - Segment: 468-481 - Tilt: 21.4°
A - Segment: 506-524 - Tilt: 49.4°
A - Segment: 544-558 - Tilt: 24.7°
B - Segment: 38-53 - Tilt: 34.3°
B - Segment: 72-86 - Tilt: 15.2°
B - Segment: 104-116 - Tilt: 7.8°
B - Segment: 150-164 - Tilt: 38.0°
B - Segment: 192-205 - Tilt: 31.9°
B - Segment: 221-235 - Tilt: 18.6°
B - Segment: 346-360 - Tilt: 33.5°
B - Segment: 385-403 - Tilt: 42.3°
B - Segment: 421-434 - Tilt: 17.1°
B - Segment: 468-481 - Tilt: 8.1°
B - Segment: 503-517 - Tilt: 29.9°
B - Segment: 547-561 - Tilt: 20.7°
Structural assessment:
MAIDEN score = -79.9943
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]