Nitrate transporter
Organism: Arabidopsis thaliana
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00854
PDB ID: 4OH3
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 24
Sequence positions:
A: 23-41|66-80|93-107|142-160|179-193|216-230|288-301|335-354|359-375|408-420|436-453|486-499
B: 539-556|577-590|606-618|654-669|694-708|727-741|822-834|862-879|897-910|937-949|971-985|1015-1028
Tilt angles:
A - Segment: 23-41 - Tilt: 47.7°
A - Segment: 66-80 - Tilt: 19.9°
A - Segment: 93-107 - Tilt: 21.0°
A - Segment: 142-160 - Tilt: 51.1°
A - Segment: 179-193 - Tilt: 30.5°
A - Segment: 216-230 - Tilt: 29.2°
A - Segment: 288-301 - Tilt: 31.1°
A - Segment: 335-354 - Tilt: 45.7°
A - Segment: 359-375 - Tilt: 41.9°
A - Segment: 408-420 - Tilt: 8.7°
A - Segment: 436-453 - Tilt: 40.1°
A - Segment: 486-499 - Tilt: 21.2°
B - Segment: 539-556 - Tilt: 49.0°
B - Segment: 577-590 - Tilt: 13.3°
B - Segment: 606-618 - Tilt: 14.0°
B - Segment: 654-669 - Tilt: 32.2°
B - Segment: 694-708 - Tilt: 24.4°
B - Segment: 727-741 - Tilt: 27.8°
B - Segment: 822-834 - Tilt: 17.9°
B - Segment: 862-879 - Tilt: 37.0°
B - Segment: 897-910 - Tilt: 17.6°
B - Segment: 937-949 - Tilt: 4.0°
B - Segment: 971-985 - Tilt: 35.1°
B - Segment: 1015-1028 - Tilt: 20.0°
Structural assessment:
MAIDEN score = -77.2811
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]