Particulate methane monooxygenase from Methylocystis sp. ATCC 49242 (ROCKWELL)
Organism: Methylocystis sp.
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF02461
PDB ID: 4PHZ
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 26.7 Å
Number of TM segments = 39
Sequence positions:
A: 185-202|230-247
C: 24-41|64-81|110-128|146-163
B: 31-51|66-84|91-111|126-143|145-165|222-243
E: 185-202|229-247
D: 4-19
G: 24-41|64-81|110-128|145-163
F: 31-51|66-84|91-111|126-143|145-165|222-243
I: 185-201|231-247
H: 4-20
K: 24-41|64-81|111-128|145-163
J: 31-51|66-84|91-112|126-143|145-165|222-243
N: 3-21
Tilt angles:
A - Segment: 185-202 - Tilt: 12.9°
A - Segment: 230-247 - Tilt: 4.3°
C - Segment: 24-41 - Tilt: 12.8°
C - Segment: 64-81 - Tilt: 18.7°
C - Segment: 110-128 - Tilt: 11.0°
C - Segment: 146-163 - Tilt: 5.1°
B - Segment: 31-51 - Tilt: 26.2°
B - Segment: 66-84 - Tilt: 16.6°
B - Segment: 91-111 - Tilt: 42.9°
B - Segment: 126-143 - Tilt: 38.5°
B - Segment: 145-165 - Tilt: 26.5°
B - Segment: 222-243 - Tilt: 42.7°
E - Segment: 185-202 - Tilt: 13.4°
E - Segment: 229-247 - Tilt: 6.6°
D - Segment: 4-19 - Tilt: 5.6°
G - Segment: 24-41 - Tilt: 13.0°
G - Segment: 64-81 - Tilt: 19.1°
G - Segment: 110-128 - Tilt: 10.6°
G - Segment: 145-163 - Tilt: 8.8°
F - Segment: 31-51 - Tilt: 26.2°
F - Segment: 66-84 - Tilt: 16.2°
F - Segment: 91-111 - Tilt: 43.6°
F - Segment: 126-143 - Tilt: 39.3°
F - Segment: 145-165 - Tilt: 26.8°
F - Segment: 222-243 - Tilt: 42.1°
I - Segment: 185-201 - Tilt: 9.2°
I - Segment: 231-247 - Tilt: 3.7°
H - Segment: 4-20 - Tilt: 14.6°
K - Segment: 24-41 - Tilt: 12.3°
K - Segment: 64-81 - Tilt: 19.4°
K - Segment: 111-128 - Tilt: 5.0°
K - Segment: 145-163 - Tilt: 10.4°
J - Segment: 31-51 - Tilt: 24.9°
J - Segment: 66-84 - Tilt: 16.5°
J - Segment: 91-112 - Tilt: 40.5°
J - Segment: 126-143 - Tilt: 38.8°
J - Segment: 145-165 - Tilt: 28.1°
J - Segment: 222-243 - Tilt: 43.3°
N - Segment: 3-21 - Tilt: 9.2°
Structural assessment:
MAIDEN score = -255.3370
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]