Antibacterial peptide ABC transporter McjD in an outward occluded state
Organism: Escherichia coli
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00664
PDB ID: 4PL0
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 26.0 Å
Number of TM segments = 4
Sequence positions:
A: 112-218|279-329
B: 149-218|253-329
Tilt angles:
A - Segment: 112-218 - Tilt: 45.3°
A - Segment: 279-329 - Tilt: 74.7°
B - Segment: 149-218 - Tilt: 65.6°
B - Segment: 253-329 - Tilt: 62.1°
Structural assessment:
MAIDEN score = -151.7054
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]