Cytochrome B6F structure from M. laminosus with the quinone analog inhibitor stigmatellin
Organism: Mastigocladus laminosus
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00033
PDB ID: 4PV1
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 25.5 Å
Number of TM segments = 13
Sequence positions:
A: 31-49|89-110|114-131|189-206
C: 259-275
B: 35-53|99-115|127-142
E: 5-23
D: 18-36
G: 8-24
F: 8-26
H: 9-25
Tilt angles:
A - Segment: 31-49 - Tilt: 43.3°
A - Segment: 89-110 - Tilt: 39.8°
A - Segment: 114-131 - Tilt: 16.6°
A - Segment: 189-206 - Tilt: 24.6°
C - Segment: 259-275 - Tilt: 11.7°
B - Segment: 35-53 - Tilt: 14.0°
B - Segment: 99-115 - Tilt: 19.7°
B - Segment: 127-142 - Tilt: 7.9°
E - Segment: 5-23 - Tilt: 35.0°
D - Segment: 18-36 - Tilt: 25.1°
G - Segment: 8-24 - Tilt: 5.3°
F - Segment: 8-26 - Tilt: 31.6°
H - Segment: 9-25 - Tilt: 18.9°
Structural assessment:
MAIDEN score = -142.3594
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]