AN INTRAMEMBRANE CDP-DAG SYNTHETASE CENTRAL FOR PHOSPHOLIPID BIOSYNTHESIS (S200C/S258C, active mutant)
Organism: Thermotoga maritima
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF01148
PDB ID: 4Q2E
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 17
Sequence positions:
A: 22-35|46-57|67-81|98-112|128-147|159-171|199-214|229-249
B: 267-280|286-299|314-326|334-348|366-380|393-409|427-441|464-478|503-517
Tilt angles:
A - Segment: 22-35 - Tilt: 20.7°
A - Segment: 46-57 - Tilt: 16.1°
A - Segment: 67-81 - Tilt: 33.1°
A - Segment: 98-112 - Tilt: 21.8°
A - Segment: 128-147 - Tilt: 44.7°
A - Segment: 159-171 - Tilt: 10.4°
A - Segment: 199-214 - Tilt: 26.1°
A - Segment: 229-249 - Tilt: 58.5°
B - Segment: 267-280 - Tilt: 38.5°
B - Segment: 286-299 - Tilt: 26.0°
B - Segment: 314-326 - Tilt: 14.4°
B - Segment: 334-348 - Tilt: 35.3°
B - Segment: 366-380 - Tilt: 37.7°
B - Segment: 393-409 - Tilt: 46.9°
B - Segment: 427-441 - Tilt: 31.3°
B - Segment: 464-478 - Tilt: 31.3°
B - Segment: 503-517 - Tilt: 40.7°
Structural assessment:
MAIDEN score = -88.2544
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]