E. coli Peptide Transporter YbgH
Organism: Escherichia coli
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00854
PDB ID: 4Q65
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 23.7 Å
Number of TM segments = 13
Sequence positions:
A: 7-24|48-63|72-86|100-117|135-149|167-182|201-217|225-243|252-271|294-312|314-329|356-372|381-396
Tilt angles:
A - Segment: 7-24 - Tilt: 28.8°
A - Segment: 48-63 - Tilt: 21.0°
A - Segment: 72-86 - Tilt: 11.7°
A - Segment: 100-117 - Tilt: 34.9°
A - Segment: 135-149 - Tilt: 18.7°
A - Segment: 167-182 - Tilt: 11.8°
A - Segment: 201-217 - Tilt: 25.6°
A - Segment: 225-243 - Tilt: 31.4°
A - Segment: 252-271 - Tilt: 35.1°
A - Segment: 294-312 - Tilt: 36.7°
A - Segment: 314-329 - Tilt: 20.1°
A - Segment: 356-372 - Tilt: 36.4°
A - Segment: 381-396 - Tilt: 3.3°
Structural assessment:
MAIDEN score = -41.7102
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]