P-glycoprotein cocrystallised with QZ-Val
Organism: Mus musculus
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00664
PDB ID: 4Q9J
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 33.3 Å
Number of TM segments = 12
Sequence positions:
A: 14-40|82-106|152-174|182-205|253-280|300-323|610-635|664-686|732-757|759-782|839-864|879-900
Tilt angles:
A - Segment: 14-40 - Tilt: 36.0°
A - Segment: 82-106 - Tilt: 30.5°
A - Segment: 152-174 - Tilt: 13.0°
A - Segment: 182-205 - Tilt: 30.9°
A - Segment: 253-280 - Tilt: 36.2°
A - Segment: 300-323 - Tilt: 23.1°
A - Segment: 610-635 - Tilt: 33.9°
A - Segment: 664-686 - Tilt: 18.9°
A - Segment: 732-757 - Tilt: 30.4°
A - Segment: 759-782 - Tilt: 25.3°
A - Segment: 839-864 - Tilt: 28.6°
A - Segment: 879-900 - Tilt: 12.1°
Structural assessment:
MAIDEN score = -52.1155
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]