Structure and Function of Neisseria gonorrhoeae MtrF Illuminates a Class of Antimetabolite Efflux Pumps
Organism: Neisseria gonorrhoeae
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF03806
PDB ID: 4R1I
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 24.9 Å
Number of TM segments = 22
Sequence positions:
A: 23-43|82-108|183-205|212-229|277-292|310-328|354-372|391-410|412-432|436-451|492-511
B: 23-43|81-109|182-204|212-229|276-292|311-329|354-372|391-410|412-432|436-452|492-511
Tilt angles:
A - Segment: 23-43 - Tilt: 26.1°
A - Segment: 82-108 - Tilt: 56.1°
A - Segment: 183-205 - Tilt: 28.1°
A - Segment: 212-229 - Tilt: 38.1°
A - Segment: 277-292 - Tilt: 10.4°
A - Segment: 310-328 - Tilt: 21.0°
A - Segment: 354-372 - Tilt: 32.0°
A - Segment: 391-410 - Tilt: 40.2°
A - Segment: 412-432 - Tilt: 21.2°
A - Segment: 436-451 - Tilt: 1.1°
A - Segment: 492-511 - Tilt: 14.4°
B - Segment: 23-43 - Tilt: 28.2°
B - Segment: 81-109 - Tilt: 54.1°
B - Segment: 182-204 - Tilt: 32.7°
B - Segment: 212-229 - Tilt: 41.3°
B - Segment: 276-292 - Tilt: 16.4°
B - Segment: 311-329 - Tilt: 26.6°
B - Segment: 354-372 - Tilt: 33.5°
B - Segment: 391-410 - Tilt: 39.8°
B - Segment: 412-432 - Tilt: 19.1°
B - Segment: 436-452 - Tilt: 3.7°
B - Segment: 492-511 - Tilt: 14.5°
Structural assessment:
MAIDEN score = -134.0373
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]