Bacterial Zn-transporter ZnuD from Neisseria meningitidis (locked conformation bound to zinc and cadmium ions)
Organism: Neisseria meningitidis
Model: Experimental
Representation: Coarse-grained
Type: β-sheet
Pfam Acc: PF00593
PDB ID: 4RDR
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 23.0 Å
Number of TM segments = 12
Sequence positions:
A: 215-225|270-283|338-359|432-443|447-457|491-498|505-511|551-557|568-575|606-614|629-636|646-652
Tilt angles:
A - Segment: 215-225 - Tilt: 38.9°
A - Segment: 270-283 - Tilt: 57.6°
A - Segment: 338-359 - Tilt: 70.1°
A - Segment: 432-443 - Tilt: 56.8°
A - Segment: 447-457 - Tilt: 48.8°
A - Segment: 491-498 - Tilt: 33.5°
A - Segment: 505-511 - Tilt: 26.7°
A - Segment: 551-557 - Tilt: 26.6°
A - Segment: 568-575 - Tilt: 27.1°
A - Segment: 606-614 - Tilt: 39.1°
A - Segment: 629-636 - Tilt: 8.8°
A - Segment: 646-652 - Tilt: 10.6°
Structural assessment:
MAIDEN score = 272.6327
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]