Lipopolysaccharide assembly complex LptD-LptE from the Escherichia coli outer membrane
Organism: Escherichia coli
Model: Experimental
Representation: Coarse-grained
Type: β-sheet
Pfam Acc: PF03968
PDB ID: 4RHB
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.1 Å
Number of TM segments = 22
Sequence positions:
A: 2-7|10-16|59-66|77-86|143-150|158-167|180-191|197-209|215-231|248-273|275-288|328-338|343-352|457-465|467-474|486-492|499-504|522-527
B: 618-625|634-639|658-664|669-688
Tilt angles:
A - Segment: 2-7 - Tilt: 14.1°
A - Segment: 10-16 - Tilt: 6.4°
A - Segment: 59-66 - Tilt: 38.9°
A - Segment: 77-86 - Tilt: 51.0°
A - Segment: 143-150 - Tilt: 35.7°
A - Segment: 158-167 - Tilt: 41.7°
A - Segment: 180-191 - Tilt: 57.7°
A - Segment: 197-209 - Tilt: 64.2°
A - Segment: 215-231 - Tilt: 68.6°
A - Segment: 248-273 - Tilt: 74.0°
A - Segment: 275-288 - Tilt: 66.1°
A - Segment: 328-338 - Tilt: 58.6°
A - Segment: 343-352 - Tilt: 42.6°
A - Segment: 457-465 - Tilt: 47.7°
A - Segment: 467-474 - Tilt: 34.8°
A - Segment: 486-492 - Tilt: 30.9°
A - Segment: 499-504 - Tilt: 27.1°
A - Segment: 522-527 - Tilt: 11.0°
B - Segment: 618-625 - Tilt: 13.3°
B - Segment: 634-639 - Tilt: 20.9°
B - Segment: 658-664 - Tilt: 37.3°
B - Segment: 669-688 - Tilt: 46.3°
Structural assessment:
MAIDEN score = 614.5625
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]