Bacterial homologue of SWEET transporters
Organism: Thermodesulfovibrio yellowstonii
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF03083
PDB ID: 4RNG
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 35.7 Å
Number of TM segments = 6
Sequence positions:
A: 2-26|33-55|58-80
C: 84-107|115-137|139-162
Tilt angles:
A - Segment: 2-26 - Tilt: 21.4°
A - Segment: 33-55 - Tilt: 10.4°
A - Segment: 58-80 - Tilt: 15.4°
C - Segment: 84-107 - Tilt: 19.2°
C - Segment: 115-137 - Tilt: 12.5°
C - Segment: 139-162 - Tilt: 13.0°
Structural assessment:
MAIDEN score = -58.5333
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]