An inward proton-transporting Anabaena sensory rhodopsin mutant
Organism: Nostoc sp.
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF01036
PDB ID: 4TL3
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 24.0 Å
Number of TM segments = 14
Sequence positions:
A: 6-21|41-55|69-83|107-122|125-140|172-186|197-213
B: 4-20|41-56|68-82|107-122|125-140|173-190|196-212
Tilt angles:
A - Segment: 6-21 - Tilt: 15.9°
A - Segment: 41-55 - Tilt: 7.5°
A - Segment: 69-83 - Tilt: 4.2°
A - Segment: 107-122 - Tilt: 19.0°
A - Segment: 125-140 - Tilt: 14.6°
A - Segment: 172-186 - Tilt: 14.4°
A - Segment: 197-213 - Tilt: 16.0°
B - Segment: 4-20 - Tilt: 30.0°
B - Segment: 41-56 - Tilt: 1.3°
B - Segment: 68-82 - Tilt: 10.5°
B - Segment: 107-122 - Tilt: 17.6°
B - Segment: 125-140 - Tilt: 11.6°
B - Segment: 173-190 - Tilt: 17.7°
B - Segment: 196-212 - Tilt: 12.7°
Structural assessment:
MAIDEN score = -127.8229
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]