An inward proton-transporting Anabaena sensory rhodopsin mutant
Organism: Nostoc sp.
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF01036
PDB ID: 4TL3
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 29.4 Å
Number of TM segments = 14
Sequence positions:
A: 6-25|36-55|59-77|92-111|116-136|158-176|187-207
B: 222-241|252-271|276-294|309-328|333-353|374-393|404-424
Tilt angles:
A - Segment: 6-25 - Tilt: 16.4°
A - Segment: 36-55 - Tilt: 6.4°
A - Segment: 59-77 - Tilt: 5.4°
A - Segment: 92-111 - Tilt: 12.5°
A - Segment: 116-136 - Tilt: 26.3°
A - Segment: 158-176 - Tilt: 16.7°
A - Segment: 187-207 - Tilt: 17.5°
B - Segment: 222-241 - Tilt: 15.4°
B - Segment: 252-271 - Tilt: 6.3°
B - Segment: 276-294 - Tilt: 6.6°
B - Segment: 309-328 - Tilt: 10.5°
B - Segment: 333-353 - Tilt: 25.6°
B - Segment: 374-393 - Tilt: 16.5°
B - Segment: 404-424 - Tilt: 16.3°
Structural assessment:
MAIDEN score = -149.6180
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]