C. elegans glutamate-gated chloride channel (GLUCL) in complex with Fab in a non-conducting conformation
Organism: Caenorhabditis elegans
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF02932
PDB ID: 4TNV
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 35.7 Å
Number of TM segments = 20
Sequence positions:
A: 211-234|238-261|271-294|312-336
C: 885-910|912-934|947-971|982-1007
B: 547-571|575-598|608-633|649-673
E: 1562-1584|1586-1609|1621-1644|1657-1682
D: 1225-1247|1249-1271|1285-1308|1319-1343
Tilt angles:
A - Segment: 211-234 - Tilt: 17.7°
A - Segment: 238-261 - Tilt: 8.0°
A - Segment: 271-294 - Tilt: 10.5°
A - Segment: 312-336 - Tilt: 19.8°
C - Segment: 885-910 - Tilt: 30.8°
C - Segment: 912-934 - Tilt: 9.0°
C - Segment: 947-971 - Tilt: 23.5°
C - Segment: 982-1007 - Tilt: 23.9°
B - Segment: 547-571 - Tilt: 23.4°
B - Segment: 575-598 - Tilt: 5.3°
B - Segment: 608-633 - Tilt: 21.2°
B - Segment: 649-673 - Tilt: 25.8°
E - Segment: 1562-1584 - Tilt: 15.3°
E - Segment: 1586-1609 - Tilt: 9.8°
E - Segment: 1621-1644 - Tilt: 13.0°
E - Segment: 1657-1682 - Tilt: 13.3°
D - Segment: 1225-1247 - Tilt: 20.9°
D - Segment: 1249-1271 - Tilt: 7.0°
D - Segment: 1285-1308 - Tilt: 14.0°
D - Segment: 1319-1343 - Tilt: 17.5°
Structural assessment:
MAIDEN score = -248.4867
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]