C. elegans glutamate-gated chloride channel (GLUCL) in complex with Fab and POPC in a lipid-modulated conformation
Organism: Caenorhabditis elegans
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF02932
PDB ID: 4TNW
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 40.0 Å
Number of TM segments = 20
Sequence positions:
A: 213-238|241-265|272-299|314-340
C: 896-921|924-949|956-982|997-1022
B: 555-580|583-608|615-641|656-682
E: 1576-1601|1604-1628|1636-1662|1677-1702
D: 1236-1262|1264-1288|1296-1322|1335-1362
Tilt angles:
A - Segment: 213-238 - Tilt: 14.0°
A - Segment: 241-265 - Tilt: 6.1°
A - Segment: 272-299 - Tilt: 6.6°
A - Segment: 314-340 - Tilt: 13.9°
C - Segment: 896-921 - Tilt: 14.0°
C - Segment: 924-949 - Tilt: 1.9°
C - Segment: 956-982 - Tilt: 10.7°
C - Segment: 997-1022 - Tilt: 15.5°
B - Segment: 555-580 - Tilt: 14.9°
B - Segment: 583-608 - Tilt: 0.3°
B - Segment: 615-641 - Tilt: 12.2°
B - Segment: 656-682 - Tilt: 13.6°
E - Segment: 1576-1601 - Tilt: 12.9°
E - Segment: 1604-1628 - Tilt: 6.2°
E - Segment: 1636-1662 - Tilt: 9.8°
E - Segment: 1677-1702 - Tilt: 13.3°
D - Segment: 1236-1262 - Tilt: 17.6°
D - Segment: 1264-1288 - Tilt: 6.4°
D - Segment: 1296-1322 - Tilt: 9.4°
D - Segment: 1335-1362 - Tilt: 18.7°
Structural assessment:
MAIDEN score = -258.8581
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]