Full length GluA2-kainate-(R,R)-2b complex crystal form A
Organism: Rattus norvegicus
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00060
PDB ID: 4U1W
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 34.8 Å
Number of TM segments = 10
Sequence positions:
A: 481-511|513-538|706-730
C: 1980-2008|2010-2034|2191-2214
B: 1229-1256|1260-1285|1452-1477
D: 2940-2964
Tilt angles:
A - Segment: 481-511 - Tilt: 38.8°
A - Segment: 513-538 - Tilt: 25.8°
A - Segment: 706-730 - Tilt: 26.6°
C - Segment: 1980-2008 - Tilt: 40.9°
C - Segment: 2010-2034 - Tilt: 31.5°
C - Segment: 2191-2214 - Tilt: 21.0°
B - Segment: 1229-1256 - Tilt: 36.0°
B - Segment: 1260-1285 - Tilt: 26.6°
B - Segment: 1452-1477 - Tilt: 29.8°
D - Segment: 2940-2964 - Tilt: 26.7°
Structural assessment:
MAIDEN score = -88.7474
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]