Full-length AMPA subtype ionotropic glutamate receptor GluA2 in the apo state
Organism: Rattus norvegicus
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00060
PDB ID: 4U2P
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 39.0 Å
Number of TM segments = 6
Sequence positions:
A: 503-535|537-565
C: 2993-3018
B: 1261-1291|1293-1321|1487-1513
Tilt angles:
A - Segment: 503-535 - Tilt: 36.4°
A - Segment: 537-565 - Tilt: 20.2°
C - Segment: 2993-3018 - Tilt: 27.3°
B - Segment: 1261-1291 - Tilt: 34.1°
B - Segment: 1293-1321 - Tilt: 15.0°
B - Segment: 1487-1513 - Tilt: 24.2°
Structural assessment:
MAIDEN score = -66.0275
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]