GluA2* in complex with partial agonist (S)-5-Nitrowillardiine
Organism: Rattus norvegicus
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00060
PDB ID: 4U4F
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 28.2 Å
Number of TM segments = 12
Sequence positions:
A: 525-543|575-614|793-812
C: 525-543|575-614|793-812
B: 525-543|576-614|793-812
D: 524-543|576-614|793-811
Tilt angles:
A - Segment: 525-543 - Tilt: 19.6°
A - Segment: 575-614 - Tilt: 28.1°
A - Segment: 793-812 - Tilt: 25.6°
C - Segment: 525-543 - Tilt: 18.8°
C - Segment: 575-614 - Tilt: 28.5°
C - Segment: 793-812 - Tilt: 23.1°
B - Segment: 525-543 - Tilt: 19.1°
B - Segment: 576-614 - Tilt: 32.7°
B - Segment: 793-812 - Tilt: 24.2°
D - Segment: 524-543 - Tilt: 24.1°
D - Segment: 576-614 - Tilt: 29.7°
D - Segment: 793-811 - Tilt: 16.1°
Structural assessment:
MAIDEN score = -89.8132
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]