POT family transporter PepTSo
Organism: Shewanella oneidensis
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00854
PDB ID: 4UVM
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 33.0 Å
Number of TM segments = 12
Sequence positions:
A: 15-38|111-131|152-173|177-199|230-252|255-279|299-327|334-355|374-396|402-427|440-464|481-503
Tilt angles:
A - Segment: 15-38 - Tilt: 24.0°
A - Segment: 111-131 - Tilt: 13.2°
A - Segment: 152-173 - Tilt: 8.1°
A - Segment: 177-199 - Tilt: 28.0°
A - Segment: 230-252 - Tilt: 40.2°
A - Segment: 255-279 - Tilt: 27.1°
A - Segment: 299-327 - Tilt: 43.0°
A - Segment: 334-355 - Tilt: 29.3°
A - Segment: 374-396 - Tilt: 21.7°
A - Segment: 402-427 - Tilt: 39.7°
A - Segment: 440-464 - Tilt: 28.6°
A - Segment: 481-503 - Tilt: 18.6°
Structural assessment:
MAIDEN score = -109.2353
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]