POT family transporter PepTSo
Organism: Shewanella oneidensis
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00854
PDB ID: 4UVM
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 29.0 Å
Number of TM segments = 14
Sequence positions:
A: 12-29|50-70|80-99|103-122|146-165|167-187|222-245|249-272|291-316|327-348|363-383|397-420|434-453|478-499
Tilt angles:
A - Segment: 12-29 - Tilt: 21.3°
A - Segment: 50-70 - Tilt: 30.8°
A - Segment: 80-99 - Tilt: 18.5°
A - Segment: 103-122 - Tilt: 17.2°
A - Segment: 146-165 - Tilt: 22.4°
A - Segment: 167-187 - Tilt: 21.1°
A - Segment: 222-245 - Tilt: 48.7°
A - Segment: 249-272 - Tilt: 39.6°
A - Segment: 291-316 - Tilt: 42.4°
A - Segment: 327-348 - Tilt: 41.5°
A - Segment: 363-383 - Tilt: 18.8°
A - Segment: 397-420 - Tilt: 37.2°
A - Segment: 434-453 - Tilt: 12.0°
A - Segment: 478-499 - Tilt: 28.3°
Structural assessment:
MAIDEN score = -94.5071
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]