Idle mammalian ribosome-Sec61 complex
Organism: Sus scrofa
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00344
PDB ID: 4W25
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 22.2 Å
Number of TM segments = 12
Sequence positions:
1: 33-61|75-90|115-130|152-166|178-193|244-258|288-305|361-375|425-441|444-458
3: 72-85
2: 37-55
Tilt angles:
1 - Segment: 33-61 - Tilt: 53.4°
1 - Segment: 75-90 - Tilt: 45.1°
1 - Segment: 115-130 - Tilt: 11.4°
1 - Segment: 152-166 - Tilt: 30.0°
1 - Segment: 178-193 - Tilt: 34.2°
1 - Segment: 244-258 - Tilt: 14.1°
1 - Segment: 288-305 - Tilt: 45.0°
1 - Segment: 361-375 - Tilt: 29.4°
1 - Segment: 425-441 - Tilt: 35.3°
1 - Segment: 444-458 - Tilt: 35.1°
3 - Segment: 72-85 - Tilt: 9.4°
2 - Segment: 37-55 - Tilt: 47.1°
Structural assessment:
MAIDEN score = -57.6019
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]