Peptide transporter from Yersinia enterocolitica at 3 Å resolution
Organism: Yersinia enterocolitica
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00854
PDB ID: 4W6V
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 25.0 Å
Number of TM segments = 10
Sequence positions:
A: 27-42|62-78|236-254|260-283|294-319|335-355|372-388|407-425|445-462|480-498
Tilt angles:
A - Segment: 27-42 - Tilt: 13.8°
A - Segment: 62-78 - Tilt: 24.0°
A - Segment: 236-254 - Tilt: 6.8°
A - Segment: 260-283 - Tilt: 45.3°
A - Segment: 294-319 - Tilt: 52.5°
A - Segment: 335-355 - Tilt: 38.9°
A - Segment: 372-388 - Tilt: 28.1°
A - Segment: 407-425 - Tilt: 30.2°
A - Segment: 445-462 - Tilt: 23.9°
A - Segment: 480-498 - Tilt: 30.7°
Structural assessment:
MAIDEN score = -112.7013
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]