Staphylococcus capitis divalent metal ion transporter (DMT) in complex with nanobody
Organism: Staphylococcus capitis
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF01566
PDB ID: 4WGV
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 14
Sequence positions:
A: 124-136|190-201|263-297|319-333
C: 65-78|118-139|141-154|171-185|214-226|265-278|314-331|359-371|381-397|422-437
Tilt angles:
A - Segment: 124-136 - Tilt: 16.6°
A - Segment: 190-201 - Tilt: 9.5°
A - Segment: 263-297 - Tilt: 50.4°
A - Segment: 319-333 - Tilt: 28.4°
C - Segment: 65-78 - Tilt: 19.7°
C - Segment: 118-139 - Tilt: 62.1°
C - Segment: 141-154 - Tilt: 11.4°
C - Segment: 171-185 - Tilt: 44.1°
C - Segment: 214-226 - Tilt: 29.0°
C - Segment: 265-278 - Tilt: 16.8°
C - Segment: 314-331 - Tilt: 47.5°
C - Segment: 359-371 - Tilt: 6.4°
C - Segment: 381-397 - Tilt: 48.6°
C - Segment: 422-437 - Tilt: 36.0°
Structural assessment:
MAIDEN score = -88.1519
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]