Plant photosystem I-LHCI super-complex at 2.8 Å resolution
Organism: Arabidopsis thaliana
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00223
PDB ID: 4XK8
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 27.6 Å
Number of TM segments = 45
Sequence positions:
A: 63-82|149-167|184-204|286-301|341-359|378-396|426-447|523-541|580-598|661-679|713-731
B: 788-807|877-895|914-934|1016-1032|1074-1092|1111-1129|1159-1180|1258-1276|1315-1333|1389-1408|1445-1463
G: 1913-1932|1978-1998
F: 1839-1859
I: 2099-2119
H: 2031-2069
K: 2165-2184|2186-2207
J: 2134-2154
L: 2251-2270|2283-2302|2339-2359
1: 2402-2423|2449-2470|2507-2527
3: 2809-2830|2860-2878|2935-2955
2: 2597-2618|2645-2663|2712-2733
4: 3020-3039|3065-3083|3129-3148
Tilt angles:
A - Segment: 63-82 - Tilt: 22.7°
A - Segment: 149-167 - Tilt: 4.5°
A - Segment: 184-204 - Tilt: 19.8°
A - Segment: 286-301 - Tilt: 12.6°
A - Segment: 341-359 - Tilt: 8.3°
A - Segment: 378-396 - Tilt: 11.9°
A - Segment: 426-447 - Tilt: 32.7°
A - Segment: 523-541 - Tilt: 18.3°
A - Segment: 580-598 - Tilt: 8.6°
A - Segment: 661-679 - Tilt: 28.9°
A - Segment: 713-731 - Tilt: 13.6°
B - Segment: 788-807 - Tilt: 20.2°
B - Segment: 877-895 - Tilt: 1.2°
B - Segment: 914-934 - Tilt: 13.2°
B - Segment: 1016-1032 - Tilt: 6.2°
B - Segment: 1074-1092 - Tilt: 10.0°
B - Segment: 1111-1129 - Tilt: 11.5°
B - Segment: 1159-1180 - Tilt: 33.0°
B - Segment: 1258-1276 - Tilt: 19.3°
B - Segment: 1315-1333 - Tilt: 10.8°
B - Segment: 1389-1408 - Tilt: 23.0°
B - Segment: 1445-1463 - Tilt: 15.6°
G - Segment: 1913-1932 - Tilt: 22.1°
G - Segment: 1978-1998 - Tilt: 28.6°
F - Segment: 1839-1859 - Tilt: 28.7°
I - Segment: 2099-2119 - Tilt: 17.5°
H - Segment: 2031-2069 - Tilt: 50.3°
K - Segment: 2165-2184 - Tilt: 28.0°
K - Segment: 2186-2207 - Tilt: 30.9°
J - Segment: 2134-2154 - Tilt: 20.4°
L - Segment: 2251-2270 - Tilt: 25.8°
L - Segment: 2283-2302 - Tilt: 20.7°
L - Segment: 2339-2359 - Tilt: 21.7°
1 - Segment: 2402-2423 - Tilt: 35.0°
1 - Segment: 2449-2470 - Tilt: 24.0°
1 - Segment: 2507-2527 - Tilt: 30.5°
3 - Segment: 2809-2830 - Tilt: 38.8°
3 - Segment: 2860-2878 - Tilt: 14.2°
3 - Segment: 2935-2955 - Tilt: 28.6°
2 - Segment: 2597-2618 - Tilt: 33.4°
2 - Segment: 2645-2663 - Tilt: 7.1°
2 - Segment: 2712-2733 - Tilt: 31.5°
4 - Segment: 3020-3039 - Tilt: 28.8°
4 - Segment: 3065-3083 - Tilt: 8.8°
4 - Segment: 3129-3148 - Tilt: 23.5°
Structural assessment:
MAIDEN score = -186.2597
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]