An archaeal mechanosensitive channel in expanded state
Organism: Methanosarcina acetivorans
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF01741
PDB ID: 4Y7J
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.7 Å
Number of TM segments = 6
Sequence positions:
A: 19-42|62-93
E: 19-38|75-92
D: 23-42|78-92
Tilt angles:
A - Segment: 19-42 - Tilt: 57.8°
A - Segment: 62-93 - Tilt: 68.0°
E - Segment: 19-38 - Tilt: 46.8°
E - Segment: 75-92 - Tilt: 51.9°
D - Segment: 23-42 - Tilt: 53.4°
D - Segment: 78-92 - Tilt: 42.7°
Structural assessment:
MAIDEN score = -58.6627
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]