An archaeal mechanosensitive channel in closed state
Organism: Methanosarcina acetivorans
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF01741
PDB ID: 4Y7K
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 31.0 Å
Number of TM segments = 10
Sequence positions:
A: 19-45|68-90
C: 19-46|66-88
B: 19-45|66-90
E: 19-45|68-89
D: 20-46|67-89
Tilt angles:
A - Segment: 19-45 - Tilt: 40.8°
A - Segment: 68-90 - Tilt: 26.9°
C - Segment: 19-46 - Tilt: 41.6°
C - Segment: 66-88 - Tilt: 37.2°
B - Segment: 19-45 - Tilt: 42.2°
B - Segment: 66-90 - Tilt: 35.2°
E - Segment: 19-45 - Tilt: 41.2°
E - Segment: 68-89 - Tilt: 22.8°
D - Segment: 20-46 - Tilt: 44.1°
D - Segment: 67-89 - Tilt: 22.7°
Structural assessment:
MAIDEN score = -153.5552
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]