Rat GLUT5 with Fv in the outward-open form
Organism: Rattus norvegicus
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00083
PDB ID: 4YBQ
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 24.6 Å
Number of TM segments = 12
Sequence positions:
A: 17-36|38-92|97-113|129-146|160-176|196-212|281-296|318-334|343-363|374-396|411-433|438-452
Tilt angles:
A - Segment: 17-36 - Tilt: 38.5°
A - Segment: 38-92 - Tilt: 24.6°
A - Segment: 97-113 - Tilt: 14.2°
A - Segment: 129-146 - Tilt: 38.5°
A - Segment: 160-176 - Tilt: 11.0°
A - Segment: 196-212 - Tilt: 6.9°
A - Segment: 281-296 - Tilt: 28.7°
A - Segment: 318-334 - Tilt: 7.0°
A - Segment: 343-363 - Tilt: 39.7°
A - Segment: 374-396 - Tilt: 50.2°
A - Segment: 411-433 - Tilt: 42.7°
A - Segment: 438-452 - Tilt: 16.7°
Structural assessment:
MAIDEN score = -81.3572
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]