Rat GLUT5 with Fv in the outward-open form
Organism: Rattus norvegicus
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00083
PDB ID: 4YBQ
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 25.5 Å
Number of TM segments = 12
Sequence positions:
A: 10-30|46-64|66-84|101-120|132-148|168-184|252-268|288-306|315-335|343-368|383-401|408-424
Tilt angles:
A - Segment: 10-30 - Tilt: 32.2°
A - Segment: 46-64 - Tilt: 31.8°
A - Segment: 66-84 - Tilt: 16.9°
A - Segment: 101-120 - Tilt: 29.6°
A - Segment: 132-148 - Tilt: 6.3°
A - Segment: 168-184 - Tilt: 10.3°
A - Segment: 252-268 - Tilt: 25.2°
A - Segment: 288-306 - Tilt: 6.3°
A - Segment: 315-335 - Tilt: 38.4°
A - Segment: 343-368 - Tilt: 49.2°
A - Segment: 383-401 - Tilt: 40.2°
A - Segment: 408-424 - Tilt: 21.6°
Structural assessment:
MAIDEN score = -56.9314
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]