Sodium-dependent citrate symporter SeCitS form Salmonella enterica
Organism: Salmonella enterica
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF03390
PDB ID: 5A1S
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 25.0 Å
Number of TM segments = 20
Sequence positions:
C: 23-43|50-72|74-94|114-130|137-168|215-230|265-286|289-317|324-351|358-381|390-438
D: 18-41|114-132|137-159|213-234|265-285|300-317|324-344|363-414|420-438
Tilt angles:
C - Segment: 23-43 - Tilt: 18.9°
C - Segment: 50-72 - Tilt: 48.9°
C - Segment: 74-94 - Tilt: 24.0°
C - Segment: 114-130 - Tilt: 34.3°
C - Segment: 137-168 - Tilt: 56.6°
C - Segment: 215-230 - Tilt: 6.6°
C - Segment: 265-286 - Tilt: 50.1°
C - Segment: 289-317 - Tilt: 27.7°
C - Segment: 324-351 - Tilt: 55.0°
C - Segment: 358-381 - Tilt: 46.2°
C - Segment: 390-438 - Tilt: 23.9°
D - Segment: 18-41 - Tilt: 38.1°
D - Segment: 114-132 - Tilt: 43.3°
D - Segment: 137-159 - Tilt: 43.5°
D - Segment: 213-234 - Tilt: 44.6°
D - Segment: 265-285 - Tilt: 40.8°
D - Segment: 300-317 - Tilt: 16.3°
D - Segment: 324-344 - Tilt: 34.5°
D - Segment: 363-414 - Tilt: 9.6°
D - Segment: 420-438 - Tilt: 19.6°
Structural assessment:
MAIDEN score = -186.8801
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]