Dual topology fluoride ion channel
Organism: Bordetella pertussis
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF02537
PDB ID: 5A40
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 21.9 Å
Number of TM segments = 8
Sequence positions:
A: 7-22|40-55|65-82|107-125
B: 132-150|158-172|193-217|219-238
Tilt angles:
A - Segment: 7-22 - Tilt: 21.2°
A - Segment: 40-55 - Tilt: 13.8°
A - Segment: 65-82 - Tilt: 38.8°
A - Segment: 107-125 - Tilt: 49.4°
B - Segment: 132-150 - Tilt: 43.5°
B - Segment: 158-172 - Tilt: 36.4°
B - Segment: 193-217 - Tilt: 59.5°
B - Segment: 219-238 - Tilt: 51.4°
Structural assessment:
MAIDEN score = -29.8328
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]