Saccharomyces cerevisiae Mep2
Organism: Saccharomyces cerevisiae
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00909
PDB ID: 5AEX
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 29.1 Å
Number of TM segments = 33
Sequence positions:
A: 34-52|64-87|124-143|149-171|184-206|228-248|257-278|289-306|309-329|340-361|389-417
C: 946-964|976-999|1036-1055|1061-1084|1095-1117|1140-1160|1169-1189|1201-1219|1221-1241|1252-1273|1300-1329
B: 490-508|520-543|580-599|605-627|640-661|684-704|713-734|745-762|765-785|796-817|844-872
Tilt angles:
A - Segment: 34-52 - Tilt: 19.3°
A - Segment: 64-87 - Tilt: 26.8°
A - Segment: 124-143 - Tilt: 20.6°
A - Segment: 149-171 - Tilt: 31.7°
A - Segment: 184-206 - Tilt: 26.9°
A - Segment: 228-248 - Tilt: 17.6°
A - Segment: 257-278 - Tilt: 25.4°
A - Segment: 289-306 - Tilt: 9.3°
A - Segment: 309-329 - Tilt: 17.5°
A - Segment: 340-361 - Tilt: 32.4°
A - Segment: 389-417 - Tilt: 51.3°
C - Segment: 946-964 - Tilt: 18.5°
C - Segment: 976-999 - Tilt: 27.6°
C - Segment: 1036-1055 - Tilt: 20.3°
C - Segment: 1061-1084 - Tilt: 27.6°
C - Segment: 1095-1117 - Tilt: 17.2°
C - Segment: 1140-1160 - Tilt: 18.8°
C - Segment: 1169-1189 - Tilt: 29.6°
C - Segment: 1201-1219 - Tilt: 10.0°
C - Segment: 1221-1241 - Tilt: 16.9°
C - Segment: 1252-1273 - Tilt: 33.5°
C - Segment: 1300-1329 - Tilt: 48.7°
B - Segment: 490-508 - Tilt: 18.6°
B - Segment: 520-543 - Tilt: 27.5°
B - Segment: 580-599 - Tilt: 20.3°
B - Segment: 605-627 - Tilt: 31.7°
B - Segment: 640-661 - Tilt: 23.1°
B - Segment: 684-704 - Tilt: 19.0°
B - Segment: 713-734 - Tilt: 25.0°
B - Segment: 745-762 - Tilt: 9.0°
B - Segment: 765-785 - Tilt: 16.7°
B - Segment: 796-817 - Tilt: 32.1°
B - Segment: 844-872 - Tilt: 46.9°
Structural assessment:
MAIDEN score = -210.2662
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]