Rabbit TRPV2 ion channel
Organism: Oryctolagus cuniculus
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF06011
PDB ID: 5AN8
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 26.4 Å
Number of TM segments = 22
Sequence positions:
A: 395-412|430-449|472-490|494-511|538-556|616-636
C: 396-412|430-448|538-556|616-636
B: 395-412|430-449|472-490|494-511|538-556|616-636
D: 396-412|430-448|472-492|494-511|538-556|616-636
Tilt angles:
A - Segment: 395-412 - Tilt: 11.3°
A - Segment: 430-449 - Tilt: 25.8°
A - Segment: 472-490 - Tilt: 26.3°
A - Segment: 494-511 - Tilt: 36.2°
A - Segment: 538-556 - Tilt: 33.4°
A - Segment: 616-636 - Tilt: 34.7°
C - Segment: 396-412 - Tilt: 18.9°
C - Segment: 430-448 - Tilt: 31.8°
C - Segment: 538-556 - Tilt: 32.8°
C - Segment: 616-636 - Tilt: 34.2°
B - Segment: 395-412 - Tilt: 10.4°
B - Segment: 430-449 - Tilt: 26.7°
B - Segment: 472-490 - Tilt: 26.1°
B - Segment: 494-511 - Tilt: 35.3°
B - Segment: 538-556 - Tilt: 32.8°
B - Segment: 616-636 - Tilt: 33.9°
D - Segment: 396-412 - Tilt: 18.0°
D - Segment: 430-448 - Tilt: 32.7°
D - Segment: 472-492 - Tilt: 16.3°
D - Segment: 494-511 - Tilt: 35.7°
D - Segment: 538-556 - Tilt: 32.1°
D - Segment: 616-636 - Tilt: 33.4°
Structural assessment:
MAIDEN score = -260.9120
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]