Cell-Free Synthesized Membrane Protein, Acetabularia rhodopsin I, at 1.52 Å
Organism: Acetabularia acetabulum
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF01036
PDB ID: 5AX0
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 21.0 Å
Number of TM segments = 7
Sequence positions:
A: 15-37|41-56|89-103|109-126|137-152|181-202|204-223
Tilt angles:
A - Segment: 15-37 - Tilt: 58.0°
A - Segment: 41-56 - Tilt: 39.5°
A - Segment: 89-103 - Tilt: 31.9°
A - Segment: 109-126 - Tilt: 56.7°
A - Segment: 137-152 - Tilt: 33.5°
A - Segment: 181-202 - Tilt: 42.1°
A - Segment: 204-223 - Tilt: 46.8°
Structural assessment:
MAIDEN score = -75.4624
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]