Cell-Free Synthesized Membrane Protein, Acetabularia rhodopsin I, at 1.52 Å
Organism: Acetabularia acetabulum
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF01036
PDB ID: 5AX0
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.4 Å
Number of TM segments = 7
Sequence positions:
A: 24-38|40-54|85-99|115-129|131-147|176-197|208-227
Tilt angles:
A - Segment: 24-38 - Tilt: 33.0°
A - Segment: 40-54 - Tilt: 41.8°
A - Segment: 85-99 - Tilt: 35.7°
A - Segment: 115-129 - Tilt: 36.6°
A - Segment: 131-147 - Tilt: 36.4°
A - Segment: 176-197 - Tilt: 53.2°
A - Segment: 208-227 - Tilt: 46.4°
Structural assessment:
MAIDEN score = -39.6276
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]