Bacterial homologue of iron transporter ferroportin in inward-facing state
Organism: Bdellovibrio bacteriovorus
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF06963
PDB ID: 5AYO
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 25.0 Å
Number of TM segments = 12
Sequence positions:
A: 19-36|43-59|84-101|110-128|162-180|184-199|244-270|277-298|308-325|340-358|379-395|405-425
Tilt angles:
A - Segment: 19-36 - Tilt: 32.3°
A - Segment: 43-59 - Tilt: 26.8°
A - Segment: 84-101 - Tilt: 20.7°
A - Segment: 110-128 - Tilt: 31.8°
A - Segment: 162-180 - Tilt: 34.5°
A - Segment: 184-199 - Tilt: 21.0°
A - Segment: 244-270 - Tilt: 48.8°
A - Segment: 277-298 - Tilt: 53.1°
A - Segment: 308-325 - Tilt: 28.2°
A - Segment: 340-358 - Tilt: 23.5°
A - Segment: 379-395 - Tilt: 18.7°
A - Segment: 405-425 - Tilt: 49.3°
Structural assessment:
MAIDEN score = -55.1834
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]