Bacterial homologue of iron transporter ferroportin in inward-facing state
Organism: Bdellovibrio bacteriovorus
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF06963
PDB ID: 5AYO
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 24.0 Å
Number of TM segments = 12
Sequence positions:
A: 18-33|40-56|81-97|107-124|160-178|180-195|224-249|256-274|289-305|318-335|359-375|385-405
Tilt angles:
A - Segment: 18-33 - Tilt: 21.3°
A - Segment: 40-56 - Tilt: 29.0°
A - Segment: 81-97 - Tilt: 17.5°
A - Segment: 107-124 - Tilt: 35.6°
A - Segment: 160-178 - Tilt: 43.7°
A - Segment: 180-195 - Tilt: 15.0°
A - Segment: 224-249 - Tilt: 49.5°
A - Segment: 256-274 - Tilt: 44.6°
A - Segment: 289-305 - Tilt: 32.3°
A - Segment: 318-335 - Tilt: 29.8°
A - Segment: 359-375 - Tilt: 14.8°
A - Segment: 385-405 - Tilt: 47.8°
Structural assessment:
MAIDEN score = -42.0968
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]