Sodium proton antiporter napa in outward-facing conformation
Organism: Thermus thermophilus
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00999
PDB ID: 5BZ3
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 33.3 Å
Number of TM segments = 4
Sequence positions:
A: 84-109|113-135|176-198|351-372
Tilt angles:
A - Segment: 84-109 - Tilt: 37.7°
A - Segment: 113-135 - Tilt: 32.0°
A - Segment: 176-198 - Tilt: 32.3°
A - Segment: 351-372 - Tilt: 7.6°
Structural assessment:
MAIDEN score = -38.1345
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]