Protein C
Organism: Neisseria gonorrhoeae
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF01554
PDB ID: 5C6P
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 26.0 Å
Number of TM segments = 12
Sequence positions:
A: 20-37|55-72|97-115|138-156|163-178|198-216|247-265|282-300|323-340|363-381|392-410|420-437
Tilt angles:
A - Segment: 20-37 - Tilt: 32.8°
A - Segment: 55-72 - Tilt: 12.5°
A - Segment: 97-115 - Tilt: 31.4°
A - Segment: 138-156 - Tilt: 28.1°
A - Segment: 163-178 - Tilt: 21.4°
A - Segment: 198-216 - Tilt: 21.8°
A - Segment: 247-265 - Tilt: 23.0°
A - Segment: 282-300 - Tilt: 15.8°
A - Segment: 323-340 - Tilt: 16.7°
A - Segment: 363-381 - Tilt: 28.4°
A - Segment: 392-410 - Tilt: 25.7°
A - Segment: 420-437 - Tilt: 11.7°
Structural assessment:
MAIDEN score = -19.6601
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]