ATP-driven lipid-linked oligosaccharide flippase PglK in apo-inward facing state (2)
Organism: Campylobacter jejuni
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00664
PDB ID: 5C76
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 32.0 Å
Number of TM segments = 10
Sequence positions:
A: 18-41|76-96|253-278|289-310
D: 573-602|637-664|709-731|738-761|818-837|856-882
Tilt angles:
A - Segment: 18-41 - Tilt: 25.3°
A - Segment: 76-96 - Tilt: 8.0°
A - Segment: 253-278 - Tilt: 38.4°
A - Segment: 289-310 - Tilt: 13.9°
D - Segment: 573-602 - Tilt: 48.8°
D - Segment: 637-664 - Tilt: 41.8°
D - Segment: 709-731 - Tilt: 22.4°
D - Segment: 738-761 - Tilt: 18.9°
D - Segment: 818-837 - Tilt: 7.9°
D - Segment: 856-882 - Tilt: 37.1°
Structural assessment:
MAIDEN score = -85.7040
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]