ATP-driven lipid-linked oligosaccharide flippase PglK in apo-inward state (1)
Organism: Campylobacter jejuni
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00664
PDB ID: 5C78
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 30.0 Å
Number of TM segments = 10
Sequence positions:
A: 19-41|76-96|253-278|291-310
D: 9-38|76-101|146-167|174-196|255-274|293-318
Tilt angles:
A - Segment: 19-41 - Tilt: 28.2°
A - Segment: 76-96 - Tilt: 13.2°
A - Segment: 253-278 - Tilt: 39.2°
A - Segment: 291-310 - Tilt: 6.9°
D - Segment: 9-38 - Tilt: 49.8°
D - Segment: 76-101 - Tilt: 40.0°
D - Segment: 146-167 - Tilt: 29.9°
D - Segment: 174-196 - Tilt: 25.0°
D - Segment: 255-274 - Tilt: 17.5°
D - Segment: 293-318 - Tilt: 41.1°
Structural assessment:
MAIDEN score = -129.5382
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]