ATP-driven lipid-linked oligosaccharide flippase PglK in apo-inward state (1)
Organism: Campylobacter jejuni
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00664
PDB ID: 5C78
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 25.0 Å
Number of TM segments = 6
Sequence positions:
A: 25-45|48-91|152-176|291-319
D: 744-765|817-841
Tilt angles:
A - Segment: 25-45 - Tilt: 42.3°
A - Segment: 48-91 - Tilt: 52.0°
A - Segment: 152-176 - Tilt: 37.6°
A - Segment: 291-319 - Tilt: 55.9°
D - Segment: 744-765 - Tilt: 43.0°
D - Segment: 817-841 - Tilt: 51.7°
Structural assessment:
MAIDEN score = -40.0292
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]